BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037F08LP1|AL430419
(924 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig929 1557 0.0
>3x_Contig929
Length = 3696
Score = 1557 bits (785), Expect = 0.0
Identities = 826/838 (98%), Gaps = 2/838 (0%)
Strand = Plus / Plus
Query: 1 aaattaacagccatagtcggccgtnaacttttttctttttttttgttttcttctctcagc 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 324 aaattaacagccatagtcggccgtaaacttttttctttttttttgttttcttctctcagc 383
Query: 61 caacattatatacggtatatatagatgtaccgaaccttgatatctaaatactatggaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 caacattatatacggtatatatagatgtaccgaaccttgatatctaaatactatggaact 443
Query: 121 agtatactttcgaggacattttgtttgaacaacaattgactcaattgactcaattgaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 agtatactttcgaggacattttgtttgaacaacaattgactcaattgactcaattgaaac 503
Query: 181 acacctgcattcgttgtctctagcaagaaaacggtaacgacaatggctagtagagatttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 acacctgcattcgttgtctctagcaagaaaacggtaacgacaatggctagtagagatttg 563
Query: 241 gcaccacaagttccagaaggttggaaagctgtttacgacgaccagtaccaaacctggttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gcaccacaagttccagaaggttggaaagctgtttacgacgaccagtaccaaacctggttt 623
Query: 301 tacgtaaatttgaagactgaacaatcccaatgggaagaacctgagggaacaacatggcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tacgtaaatttgaagactgaacaatcccaatgggaagaacctgagggaacaacatggcca 683
Query: 361 cggggtgttgaacaaagaccagcaggtccaccaccttcagcmagctattcaagtaatgta 420
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 684 cggggtgttgaacaaagaccagcaggtccaccaccttcagcaagctattcaagtaatgta 743
Query: 421 ccggaaaaagctcctgaacctcagtacgtgcagcagcagcctgagccacagccatcttat 480
|||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 744 ccggaaaaagctcctgaacctcagtacgtgcagcagcagcctgagcaacagcaatcttat 803
Query: 481 ccagctcaacaaccggagctcaatcacaaccacaatcgtatcccactgaaagttatccgg 540
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 804 ccagctcaacaaccggagctcaatcacaaccacaatcgtatccaactgaaagttatccgg 863
Query: 541 ctcaaagctatcctcagcaacaaccggtataccagcagccacaaccggcataccaacaac 600
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 864 ctcaaagctatcctcagcaacaaccggtataccagcagcaacaaccggcataccaacaac 923
Query: 601 cttatgtcgcaactccagctcaaggaacggcccaaccacaggaacagcagaaagcatcca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 924 cttatgtcgcaactccagctcaaggaacggcccaaccacaggaacagcagaaagcatcca 983
Query: 661 agggctacgggagttctgtgctaggaggtatcgctggtattggta-ccggtctgttggcc 719
|||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 984 agggctacgggagtactgtgctaggaggtatcgctggtattggtacccggtctgttggcc 1043
Query: 720 ggatcattgctatcacatgcgatgtcatctcaccatgataagaagcataacgaaagccat 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1044 ggatcattgctatcacatgcgatgtcatctcaccatgataagaagcataacgaaagccat 1103
Query: 780 ttcagtgggtctagtgggtctagtggctttggtggctttggtggt-tttggtggctcc 836
|||||||||||| |||||||||||||||||||||| ||| ||||| ||||||||||||
Sbjct: 1104 ttcagtgggtctcgtgggtctagtggctttggtggatttagtggtatttggtggctcc 1161
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7053
Number of Sequences: 1807
Number of extensions: 7053
Number of successful extensions: 151
Number of sequences better than 1.0e-20: 1
length of query: 924
length of database: 10,358,551
effective HSP length: 16
effective length of query: 908
effective length of database: 10,329,639
effective search space: 9379312212
effective search space used: 9379312212
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)